cytoscape_layout
================

.. py:module:: cytoscape_layout

.. autoapi-nested-parse::

   Cytoscape layout generator for Dash applications.

   This module provides utilities for converting model graphs to Dash-Cytoscape format
   for interactive visualization.



Attributes
----------

.. autoapisummary::

   cytoscape_layout.params


Functions
---------

.. autoapisummary::

   cytoscape_layout.model_graph_to_cytoscape
   cytoscape_layout.get_cytoscape_stylesheet
   cytoscape_layout.get_cytoscape_layout


Module Contents
---------------

.. py:function:: model_graph_to_cytoscape(parameters, models, constraints, connections=None)

   Convert model graph to Cytoscape elements format.

   :param parameters: List of parameter names
   :type parameters: :py:class:`list` of :py:class:`str`
   :param models: List of model names
   :type models: :py:class:`list` of :py:class:`str`
   :param constraints: List of constraint names
   :type constraints: :py:class:`list` of :py:class:`str`
   :param connections: List of (source, target) tuples for explicit connections
                       If None, auto-generates connections
   :type connections: :py:class:`list` of :py:class:`tuple`, *optional*

   :returns: Cytoscape elements list with nodes and edges
   :rtype: :py:class:`list`


.. py:function:: get_cytoscape_stylesheet()

   Get default Cytoscape stylesheet for model graphs.

   :returns: Cytoscape stylesheet
   :rtype: :py:class:`list`


.. py:function:: get_cytoscape_layout()

   Get default Cytoscape layout configuration.

   :returns: Cytoscape layout configuration
   :rtype: :py:class:`dict`


.. py:data:: params
   :value: ['V', 'e', 'd_t', 'f', 'E_p']